Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015875913.1_cds_XP_016435939.1_31844
CDS Infomation

[gene=LOC107762127] [db_xref=GeneID:107762127] [protein=flap endonuclease GEN-like 2] [protein_id=XP_016435939.1] [location=join(100498..100565,100679..100836,101731..101792,101923..102044,102394..102445,102632..102704,102805..102878,106158..106217,106344..106509,106612..106711,106895..106977,107231..107331,108197..108327,110091..110637)] [gbkey=CDS]
Sequence

ATGGGCGTAAAGAACCTTTGGGACATATTAGAATCTTGCAAGAAAACTCTTCCTCTTCAT
CATCTCCAGAACAAGAGGGTATGTATAGATCTTTCTTGCTGGATAGTTCAACTTCAAAAT
GTCAACAAATCTCACTGTGCCATCAAAGACAAGCTTTATCTCAGGGGTCTCTTCCACCGC
CTTAGAGCTCTCATTGCTTTGAATTGTAGCCTCATCTTTGTCACCGATGGAGCCATTCCT
GCTATCAAATCATCTACTTATAGAAGGCGACTAAATCCTGGAAATGTGCTCACTCAAGAT
GAGGCGATTAAACCGTCATCAATACGAAGAAACGCAGGATCTGAATTTTCACGCATGATA
AAGGAGGCTAAAGTTCTTGGAAATGCACTTGGAATTCCTTGCTTAGATGGGATTGAGGAG
GCTGAAGCTCAATGCGCAGTATTAAACTATGAATCATTCTGTGATGGATGTTTCACATCA
GATTCTGATGTCTTCCTATTTGGGGCAAGGACAGTGTATAGAGATATTTGCCTTGGGGAA
GGTGGGTATCTTCTTTGCTATGAAATGGATGATATTGAGAGAAAGCTTGGACTTGGAAGG
AACTCCTTGATAACGCTGGCTGTTATTCTTGGTGGTGATTACTCTGAAGGAGTTTATGGG
CTTGGTCGGGAGTCAGCTTGTCAGATTGTTAAATCAATTGGTGATAGTGCTGTTCTTCAA
TGGATTGCATCAGAAGGATTTTCCTTCGTAAAGAAGCAAAAAGGTTCTAAGAAAAAGATT
GAAGATGACAAATGCAATGGTAGAGAAAATGCTGCAGAGTATAAAAATCCTAATGGAAGC
AAATGCCCTTCACAAATGAAAAGTCAGACGTTGCAAGTATTAAATGCATATCTGAAACCA
AAGTGCCATTCAGCGGAATCTGATGCCGTACAACGGATTCTTGTGTTGTATCCATATATC
CGCAGCCAGCTTCAGCAAATATGCACTGAATTTCTTGATTGGCCTCCTGAGAAGACAGAC
GAGTATATCCTTCCTAAGATTGCTGAAAGGGAACTGCGGAGATTCGCCAACTTGCGGTCC
ACTGCATCACAATTGGGAGTCCAGCTTCCATTAAATGAGATGCCAATAAAGTGTCCTTTA
TCTCGAATTATAAAGCCGAGGAAAGTTCAAGGAGTAGATTGCTTTGAGGTATCTTGGGAA
GAAATGGATGGACTTGAAACCTCTATAGTACCAGCTGATCTCGTTCAGAGGGCTTGTCCG
GAAAGGATTTTGGAGTTCCAGGAAAGACGAGTTCAAGGAAAGAAAAGAAATAATACTAGG
TCAAGACGACCGAGACTAGAGAAAATGCCGCCATTGGGTCAGATTGATCAAAAACTCCAA
GACCTCTTGCTTGAGGTTGATCGAGAAAGCTCAGCTGCTGATGGTGCAACTGTTTTGTTT
GGATCAGCATCAGAAGATGATGAAAGCATTGCTCAAATTCATATAGACTCAAGCATACAG
ACGCATAGTACGTGGAATAGCTACAGTGTCAAGAAGGGTTTTGCTTCTGGGAGCCCCATT
TGCCAAGAGGACGACATTTTACCAGCTTTGTCTAAAGCTGAAGTAATTGATCTCACAAGT
CCTCCACCAGTGCGGCATGCTTCTGGGAAATCCAAACACCAGGAGGAGGACAACGTTGAA
TGCATTGATGTAATTGAGCTTAGTGATTCAGAAAATGATATGTTTTCTCCTGAACATATA
AGAAGAGCCAGAGAACTGAGAATGTTCATTGCGGGAATTAAGGACAAGTTTTACTGA

Peptide Sequence

PEP ID

XP_016435939.1
PEP Infomation

PREDICTED: flap endonuclease GEN-like 2 [Nicotiana tabacum]
Sequence

MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVNKSHCAIKDKLYLRGLFHR
LRALIALNCSLIFVTDGAIPAIKSSTYRRRLNPGNVLTQDEAIKPSSIRRNAGSEFSRMI
KEAKVLGNALGIPCLDGIEEAEAQCAVLNYESFCDGCFTSDSDVFLFGARTVYRDICLGE
GGYLLCYEMDDIERKLGLGRNSLITLAVILGGDYSEGVYGLGRESACQIVKSIGDSAVLQ
WIASEGFSFVKKQKGSKKKIEDDKCNGRENAAEYKNPNGSKCPSQMKSQTLQVLNAYLKP
KCHSAESDAVQRILVLYPYIRSQLQQICTEFLDWPPEKTDEYILPKIAERELRRFANLRS
TASQLGVQLPLNEMPIKCPLSRIIKPRKVQGVDCFEVSWEEMDGLETSIVPADLVQRACP
ERILEFQERRVQGKKRNNTRSRRPRLEKMPPLGQIDQKLQDLLLEVDRESSAADGATVLF
GSASEDDESIAQIHIDSSIQTHSTWNSYSVKKGFASGSPICQEDDILPALSKAEVIDLTS
PPPVRHASGKSKHQEEDNVECIDVIELSDSENDMFSPEHIRRARELRMFIAGIKDKFY

Transcript Sequence

Gene sequence data has not been registered.